Protein Model on 1p9m_A_2_B_2 (TEMPLATE: 1p9m )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RA_HUMAN) A 2 (A) polymer(polypeptide(L)) [298 aa] Interleukin-6 receptor beta chain :IL6RB_HUMAN
2 b B 2 (B) polymer(polypeptide(L)) [163 aa] Interleukin-6 :IL6_HUMAN 126P(G) 128S(K) 148L(W) 151R(H) 185S 188Y 189I(F) 190V 191S(N) 209Q(D) 247S 248F(V) (identity: 33.3 %/28.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1p9m_A_2 identity=28.9%
queryA       106:VHLLVDVPPEEPQ-LSCFRKSPLSNVVCEW-GPRST---PSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCV----AS: 196
                :       *** *  ***          *** * * *      * *      **    *                **        *  * *   *      :
1p9m_A_2      96:ITIISGLPPEKPKNLSCIVNEG-KKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDY----STVYFVNIEVWVEAEN: 180
SecStr          :     B      EEEE  EESS-S BEEEEE  S  SS  EEEEEEEETTEE   EE ---------- TT SS EE SS----    SS EEEEEEEE :    
ExpBur          :bebebbbebeebeebebbbeee-eebebebeeeeebebeeebbbebeeeeeeeeebeb----------eeeeebebebeb----eeeeebebebbbbbeb:    
Contact         :                     b b                       b  b                                 b  bbbb         

queryA       197:SVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHCVIHDAWSGLRHVVQLR: 293
                :  *   *    *       * ** *  *         *  **  *     *   *     **     *       *           *       *   *:
1p9m_A_2     181:ALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI--KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIR: 278
SecStr          :TT  EE   EEE TTTSEE     S EEE TTT TT EEEE    TT--TTTS EEEEEEEEETT SS EE  TTTTSS  SEEEE S  SS  EEEEEE:    
ExpBur          :eeeeeebeeeebbbbeebebeebeebebeeeeeeeeebebebeebeb--eeebebebbbbebeeeeeeeeebeeeebeeeeeebebeebeeebebbbebe:    
Contact         :            b                                     bb                                                

queryA       294:AQEEFGQGEWSEWSPEAMG: 312
                :   * * * ** ** ** *:
1p9m_A_2     279:CMKEDGKGYWSDWSEEASG: 297
SecStr          :EEETT  S        EEE:    
ExpBur          :bbbeeeeeeebeebeebee:    


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