Protein Model on 1pvh_A_1_B_1 (TEMPLATE: 1pvh )

CurrentView:HTML5 Change to:[JAVA (faster than HTML5)] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RA_HUMAN) A 1 (A) polymer(polypeptide(L)) [201 aa] Interleukin-6 receptor beta chain :IL6RB_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [169 aa] Leukemia inhibitory factor :LIF_HUMAN 147V(E) 148L(W) 149L(A) 150V(T) 151R(H) 152K 185S 189I(F) 190V 191S(N) 193C(E) 207T(N) 209Q(D) (identity: 23.1 %/29.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1pvh_A_1 identity=29.9%
queryA       112:VPPEEPQ-LSCFRKSPLSNVVCEW-GPRST---PSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCV----ASSVGSKF: 202
                : *** *  ***          *** * * *      * *      **    *                **        *  * *   *        *   :
1pvh_A_1       2:LPPEKPKNLSCIVNEG-KKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDY----STVYFVNIEVWVEAENALGKVT:  86
SecStr          :      EEEEEEEETT-S  EEEEE  S  SS  EEEEEEE SS B   EE ---------- SSSTTEEE SS----   TTS EEEEEEEEETTEEEE:    
ExpBur          :eebeebeebebbbebe-eebebebeeeeebeeeeebbbbbeeeeeebeebeb----------eeeeeeebebeb----eeebeeebebbbbbebeeeeee:    
Contact         :                                        bbbbbb                                b   bbb b             

queryA       203:SKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHCVIHDAWSGLRHVVQLRAQEEFG: 299
                :*    *       * ** *  *         *  **  *     *   *     **     *       *           *       *   *   * *:
1pvh_A_1      87:SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI--KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG: 184
SecStr          :   EEE GGGGEE    EEEEEE TTSSSSEEEEEEE  GG--GGTS EEEEEEEEESS SS EE  GGGG S  SEEEEES  SS EEEEEEEEEETTS:    
ExpBur          :beeeebbbbeebbbeebeebebeeeeeeeebbebebebbeb--eeebebebbbbebeeeeeeeeebeeeebeeeeeebebeebeeeeebbbbbebbbeee:    
Contact         :    b b                                                                                             

queryA       300:QGEWSEWSPEAMG: 312
                : * ** ** ** *:
1pvh_A_1     185:KGYWSDWSEEASG: 197
SecStr          : S        EEE:    
ExpBur          :eeeebeebeebeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123