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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
56506 274 2 P59632(AP3A_CVHSA) RecName: Full=ORF3a protein;AltName: Full=Accessory protein 3a;AltName: Full=Protein 3a;AltName: Full=Protein U274;AltName: Full=Protein X1;
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P59632(AP3A_CVHSA)]

region name description
1-274 CHAIN /note="ORF3a protein" /id="PRO_0000106131"
1-34 TOPO_DOM /note="Extracellular"
35-55 TRANSMEM /note="Helical"
56-78 TOPO_DOM /note="Cytoplasmic"
79-99 TRANSMEM /note="Helical"
100-104 TOPO_DOM /note="Extracellular"
105-125 TRANSMEM /note="Helical"
126-274 TOPO_DOM /note="Cytoplasmic"
83-86 COMPBIAS /note="Poly-Leu"
267-270 COMPBIAS /note="Poly-Thr"
1-274 DISORDER predicted by DISOPRED (1-6,8-8,10-10,13-13,266-274)

pdb_id a1 identity[%]2 description
6xdc A 76.6 AP3A_SARS2 Protein 3a
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
274 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6xdc[2] B AP3A_SARS2 Protein 3a[193 aa] A 88.1
AP3A_SARS2 Protein 3a
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.