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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
36095 76 6 P59637(VEMP_CVHSA) RecName: Full=Envelope small membrane protein {ECO:0000255|HAMAP-Rule:MF_04204}; Short=E protein {ECO:0000255|HAMAP-Rule:MF_04204}; Short=sM protein {ECO:0000255|HAMAP-Rule:MF_04204};
QUERYSEQ
MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPTVYVYSRVKNLNSSEGVPDLLV
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P59637(VEMP_CVHSA)]

76
region name description
1-76 CHAIN /note="Envelope small membrane protein" /id="PRO_0000106074"
1-16 TOPO_DOM /note="Virion surface"
17-37 TRANSMEM /note="Helical"
38-76 TOPO_DOM /note="Intravirion"

MONOMER
76
pdb_id a1 identity[%]2 description
2mm4 A 94.8 VEMP_CVHSA Envelope small membrane protein
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HOMO
76 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
5x29[5] B VEMP_CVHSA Envelope small membrane protein[58 aa] C 100.0
/94.8
8
/8
VEMP_CVHSA Envelope small membrane protein
5x29[5] D VEMP_CVHSA Envelope small membrane protein[58 aa] C 100.0
/94.8
7
/7
VEMP_CVHSA Envelope small membrane protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.