#WARNING:no index is registered index 'YP_009725303.1' in 'http://www.uniprot.org/uniprot/'

[Full Bars]

[SiteTable]


Summary Bars[0.0 %]


[Back to Search Page]

[Back to HOMCOS]


[help]
seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100]
[show] [download] [help]
PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
35444 83 32 YP_009725303.1()
QUERYSEQ
SKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [YP_009725303.1()]

83
region name description
1-83 DISORDER predicted by DISOPRED (1-1,83-83)

MONOMER
83
pdb_id a1 identity[%]2 description
1ysy A 98.8 R1AB_CVHSA Replicase polyprotein 1ab (pp1ab) (ORF1AB)
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
83 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6m71[1] C R1AB_SARS2 SARS-Cov-2 NSP 8[43 aa] B 100.0
/100.0
20
/20
R1AB_SARS2 SARS-Cov-2 NSP 7
5f22[26] B R1AB_CVHSA Non-structural protein[115 aa] A 100.0
/98.7
30
/30
R1A_CVHSA Non-structural protein 7
2ahm[4] G R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] A 100.0
/98.6
4
/4
R1AB_CVHSA Replicase polyprotein 1ab, light chain
6xip[8] D R1AB_SARS2 Non-structural protein 8[117 aa] A 100.0
/100.0
10
/10
R1AB_SARS2 Non-structural protein 7
2ahm[18] F R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[143 aa] B 100.0
/98.6
6
/6
R1AB_CVHSA Replicase polyprotein 1ab, light chain
2ahm[8] F R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[143 aa] C 100.0
/98.6
5
/5
R1AB_CVHSA Replicase polyprotein 1ab, light chain
6xqb[1] D R1AB_SARS2 Non-structural protein 8[31 aa] C 100.0
/100.0
12
/12
R1AB_SARS2 Non-structural protein 7
7bzf[11] A R1AB_SARS2 RNA-directed RNA polymerase[914 aa] C 100.0
/100.0
16
/16
R1AB_SARS2 Non-structural protein 7
6xez[1] E R1AB_SARS2 nsp13[596 aa] C 100.0
/100.0
1
/1
R1AB_SARS2 nsp7
7bw4[1] D R1AB_SARS2 nsp8[87 aa] C 100.0
/100.0
15
/15
R1AB_SARS2 nsp7
7bv1[1] D R1AB_SARS2 nsp8[99 aa] C 100.0
/100.0
16
/16
R1AB_SARS2 nsp7
3ub0[2] A R1AB_FIPV Non-structural protein 6, nsp6,[190 aa] C 37.9
/42.3
29
/31
R1AB_FIPV Non-structural protein 7, nsp7
3ub0[2] A R1AB_FIPV Non-structural protein 6, nsp6,[190 aa] B 66.7
/41.5
9
/9
R1AB_FIPV Non-structural protein 7, nsp7
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
83 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2ahm[8] A R1AB_CVHSA Replicase polyprotein 1ab, light chain[77 aa] D 100.0
/98.6
4
/4
R1AB_CVHSA Replicase polyprotein 1ab, light chain
6xip[8] A R1AB_SARS2 Non-structural protein 7[72 aa] C 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 7
3ub0[2] C R1AB_FIPV Non-structural protein 7, nsp7[82 aa] B 28.6
/41.5
14
/14
R1AB_FIPV Non-structural protein 7, nsp7
3ub0[2] B R1AB_FIPV Non-structural protein 7, nsp7[82 aa] C 66.7
/42.3
15
/15
R1AB_FIPV Non-structural protein 7, nsp7
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
83 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6wtc[1] E ACY
ACETIC ACID[4 atoms]
A 100.0
/100.0
2
/2
R1AB_SARS2 SARS-CoV-2 NSP7
6wtc[1] F ACY
ACETIC ACID[4 atoms]
C 100.0
/100.0
1
/1
R1AB_SARS2 SARS-CoV-2 NSP7
6xip[1] G EDO
1,2-ETHANEDIOL[4 atoms]
C 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 7
6xip[3] E EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 7
6wqd[1] E EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
3
/3
R1AB_SARS2 SARS-CoV-2 NSP7
2ahm[4] I GOL
GLYCEROL[6 atoms]
A 100.0
/98.6
2
/2
R1AB_CVHSA Replicase polyprotein 1ab, light chain
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.