Last position-specific scoring matrix computed, weighted observed percentages rounded down, information per position, and relative weight of gapless real matches to pseudocounts
           A  R  N  D  C  Q  E  G  H  I  L  K  M  F  P  S  T  W  Y  V   A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V
    1 M   -1 -2 -2 -3 -2  0 -2 -3 -2  1  2 -2  6  0 -3 -2 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0  0.34 0.00
    2 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
    3 Q   -1 -1 -1 -1 -3  3  0 -2 -1 -3 -3  0 -2 -4  7 -1 -1 -3 -3 -3    0   0   0   0   0  35   0   0   0   0   0   0   0   0  65   0   0   0   0   0  1.21 0.00
    4 S    1 -1  0 -1 -2  0  0 -1 -1 -3 -3  0 -2 -3  5  3  1 -3 -2 -2    0   0   0   0   0   0   0   0   0   0   0   0   0   0  33  67   0   0   0   0  0.65 0.00
    5 C    0 -4 -3 -4 10 -3 -4 -3 -3 -1 -1 -3 -2 -3 -3 -1 -1 -3 -3 -1    0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  1.20 0.00
    6 Y   -2 -2 -2 -3 -3 -2 -2 -3  2 -1 -1 -2 -1  3 -3 -2 -2  2  7 -1    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0  0.85 0.00
    7 N   -2  0  6  1 -3  0  0  0  1 -4 -4  0 -2 -3 -2  1  0 -4 -2 -3    0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.72 0.00
    8 F   -2 -3 -3 -4 -3 -4 -4 -3 -1  0  0 -3  0  7 -4 -3 -2  1  3 -1    0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0  0.73 0.00
    9 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   10 K   -1  2  0 -1 -3  1  1 -2 -1 -3 -3  5 -2 -3 -1  0 -1 -3 -2 -3    0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0  0.51 0.00
   11 E   -1  0  0  2 -4  2  6 -2  0 -4 -3  1 -2 -4 -1  0 -1 -3 -2 -3    0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0  0.73 0.00
   12 Q   -1  1  0  0 -3  6  2 -2  0 -3 -2  1  0 -4 -1  0 -1 -2 -2 -2    0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.65 0.00
   13 H   -2  0  1 -1 -3  0  0 -2  8 -4 -3 -1 -2 -1 -2 -1 -2 -3  2 -4    0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0  0.85 0.00
   14 C    0 -4 -3 -4 10 -3 -4 -3 -3 -1 -1 -3 -2 -3 -3 -1 -1 -3 -3 -1    0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  1.20 0.00
   15 Q   -1  1  0  0 -3  6  2 -2  0 -3 -2  1  0 -4 -1  0 -1 -2 -2 -2    0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.65 0.00
   16 K   -1  2  0 -1 -3  1  1 -2 -1 -3 -3  5 -2 -3 -1  0 -1 -3 -2 -3    0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0  0.51 0.00
   17 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   18 S    1 -1  1  0 -1  0  0  0 -1 -3 -3  0 -2 -3 -1  4  2 -3 -2 -2    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0  0.45 0.00
   19 T    0 -1  0 -1 -1 -1 -1 -2 -2 -1 -1 -1 -1 -2 -1  2  5 -3 -2  0    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0   0  0.47 0.00
   20 Q   -1  1  0  0 -3  6  2 -2  0 -3 -2  1  0 -4 -1  0 -1 -2 -2 -2    0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.65 0.00
   21 K   -1  4  0 -1 -4  1  1 -2 -1 -3 -3  4 -2 -3 -1  0 -1 -3 -2 -3    0  33   0   0   0   0   0   0   0   0   0  67   0   0   0   0   0   0   0   0  0.52 0.00
   22 G    0 -2  0  0 -3  0  2  5 -1 -4 -4 -1 -3 -4 -2  0 -1 -3 -3 -3    0   0   0   0   0   0  33  67   0   0   0   0   0   0   0   0   0   0   0   0  0.65 0.00
   23 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   24 E   -1  0  0  2 -4  2  6 -2  0 -4 -3  1 -2 -4 -1  0 -1 -3 -2 -3    0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0  0.73 0.00
   25 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   26 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   27 V    0 -3 -3 -4 -1 -2 -3 -4 -3  3  1 -3  1 -1 -3 -2  0 -3 -1  4    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100  0.34 0.00
   28 K   -1  2  0 -1 -3  1  1 -2 -1 -3 -3  5 -2 -3 -1  0 -1 -3 -2 -3    0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0  0.51 0.00
   29 P   -1 -2 -2 -2 -3 -1 -1 -2 -2 -3 -3 -1 -3 -4  8 -1 -1 -4 -3 -3    0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0  2.04 0.00
   30 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   31 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   32 V    3 -2 -2 -2 -1 -1 -1 -1 -2  1 -1 -1  0 -2 -1  0  0 -3 -2  2   65   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  35  0.23 0.00
   33 P   -1 -2 -3 -2 -2 -2 -2 -3 -3 -1  1 -2  0 -2  7 -1 -1 -3 -2 -1    0   0   0   0   0   0   0   0   0   0  32   0   0   0  68   0   0   0   0   0  1.16 0.00
   34 H   -2  0  1 -1 -3  0  0 -2  8 -4 -3 -1 -2 -1 -2 -1 -2 -3  2 -4    0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0  0.85 0.00
   35 H   -2  0  1 -1 -3  0  0 -2  8 -4 -3 -1 -2 -1 -2 -1 -2 -3  2 -4    0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0  0.85 0.00
   36 V    0 -3 -3 -4 -1 -2 -3 -4 -3  3  1 -3  1 -1 -3 -2  0 -3 -1  4    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100  0.34 0.00
   37 V    0 -3 -3 -4 -1 -2 -3 -4 -3  3  1 -3  1 -1 -3 -2  0 -3 -1  4    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100  0.34 0.00
   38 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   39 T    0 -2 -2 -2 -1 -2 -2 -3 -3  2  0 -2  0 -1 -2  0  3 -3 -2  3    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  35   0   0  65  0.24 0.00
   40 V   -1 -3 -3 -4 -1 -3 -3 -4 -4  4  1 -3  1  0 -3 -2 -1 -3 -1  3    0   0   0   0   0   0   0   0   0  65   0   0   0   0   0   0   0   0   0  35  0.35 0.00
   41 Q   -1  1  0  0 -3  6  2 -2  0 -3 -2  1  0 -4 -1  0 -1 -2 -2 -2    0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.65 0.00
   42 E   -1  0  0  2 -4  2  6 -2  0 -4 -3  1 -2 -4 -1  0 -1 -3 -2 -3    0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0  0.73 0.00
   43 I   -1 -3 -4 -4 -1 -3 -4 -4 -4  4  2 -3  1  0 -3 -3 -1 -3 -1  3    0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0  0.39 0.00
   44 Q   -1  1  0  0 -3  6  2 -2  0 -3 -2  1  0 -4 -1  0 -1 -2 -2 -2    0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.65 0.00
   45 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   46 Q   -1 -1 -2 -2 -2  3  0 -3 -1  1  3 -1  2  0 -2 -2 -1 -2 -1  0    0   0   0   0   0  35   0   0   0   0  65   0   0   0   0   0   0   0   0   0  0.24 0.00
   47 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   48 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   49 V    0 -3 -3 -4 -1 -2 -3 -4 -3  3  1 -3  1 -1 -3 -2  0 -3 -1  4    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100  0.34 0.00
   50 G    0 -3  0 -1 -3 -2 -2  6 -2 -4 -4 -2 -3 -3 -2  0 -2 -3 -3 -4    0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0  1.04 0.00
   51 E   -1  0  0  2 -4  2  6 -2  0 -4 -3  1 -2 -4 -1  0 -1 -3 -2 -3    0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0  0.73 0.00
   52 L   -2 -3 -4 -4 -1 -3 -3 -4 -3  4  3 -3  2  0 -3 -3 -1 -2 -1  2    0   0   0   0   0   0   0   0   0  65  35   0   0   0   0   0   0   0   0   0  0.36 0.00
   53 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   54 L   -1 -1 -2 -2 -2  3  0 -3 -1  1  3 -1  2  0 -3 -2 -1 -2 -1  0    0   0   0   0   0  32   0   0   0   0  68   0   0   0   0   0   0   0   0   0  0.25 0.00
   55 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   56 E   -1  0  0  2 -4  2  6 -2  0 -4 -3  1 -2 -4 -1  0 -1 -3 -2 -3    0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0  0.73 0.00
   57 W   -3 -3 -4 -5 -3 -2 -3 -3 -3 -3 -2 -3 -2  1 -4 -3 -3 12  2 -3    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0  2.30 0.00
   58 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   59 A    4 -2 -2 -2  0 -1 -1  0 -2 -1 -2 -1 -1 -2 -1  1  0 -3 -2  0  100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.40 0.00
   60 M   -1 -1 -1  1 -3  1  4 -3 -1 -1  0  0  3 -2 -2 -1 -1 -3 -2 -1    0   0   0   0   0   0  65   0   0   0   0   0  35   0   0   0   0   0   0   0  0.34 0.00
   61 A    3 -2 -2 -2 -1 -1 -1 -1 -2  1 -1 -1  0 -2 -1  1  0 -3 -2  2   67   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  33  0.24 0.00
   62 V    0 -3 -3 -4 -1 -2 -3 -4 -3  3  1 -3  1 -1 -3 -2  0 -3 -1  4    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100  0.34 0.00
   63 M   -1  1 -1 -1 -3  1  0 -2 -1 -1  0  4  3 -2 -2 -1 -1 -3 -2 -1    0   0   0   0   0   0   0   0   0   0   0  65  35   0   0   0   0   0   0   0  0.24 0.00
   64 L   -2 -2 -4 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0  0.45 0.00
   65 L   -1 -2 -3 -2 -2 -2 -2 -3 -3 -1  1 -2  0 -2  7 -1 -1 -3 -2 -1    0   0   0   0   0   0   0   0   0   0  35   0   0   0  65   0   0   0   0   0  1.08 0.00
   66 L    0 -1  0 -1 -1 -1 -1 -1 -2  0  2 -1  0 -1 -2  3  1 -3 -2 -1    0   0   0   0   0   0   0   0   0   0  35   0   0   0   0  65   0   0   0   0  0.19 0.00
   67 L   -2  5 -1 -2 -3  0 -1 -3 -1 -1  2  1  0 -1 -3 -1 -1 -3 -2 -1    0  65   0   0   0   0   0   0   0   0  35   0   0   0   0   0   0   0   0   0  0.36 0.00
   68 C   -1 -2 -3 -4  6 -2 -3 -3  1 -1 -1 -2 -1  2 -3 -2 -1  1  6 -1    0   0   0   0  35   0   0   0   0   0   0   0   0   0   0   0   0   0  65   0  0.66 0.00
   69 C    0 -4 -3 -4 10 -3 -4 -3 -3 -1 -1 -3 -2 -3 -3 -1 -1 -3 -3 -1    0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  1.20 0.00
   70 C    0 -4 -3 -4 10 -3 -4 -3 -3 -1 -1 -3 -2 -3 -3 -1 -1 -3 -3 -1    0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  1.20 0.00
   71 L   -2 -2 -3 -4 -1 -2 -3 -4 -3  2  4 -3  2  0 -3 -3 -1 -2 -1  1    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.00     0.00
   72 T    0 -1  0 -1 -1 -1 -1 -2 -2 -1 -1 -1 -1 -2 -1  1  5 -2 -2  0    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.00     0.00
   73 D   -2 -2  1  6 -4  0  2 -1 -1 -3 -4 -1 -3 -4 -2  0 -1 -4 -3 -3    0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  0.00     0.00

                      K         Lambda
Standard Ungapped    0.1336     0.3265
Standard Gapped      0.0410     0.2670
PSI Ungapped         0.1336     0.3265
PSI Gapped           0.0410     0.2670